PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_02039.1_g00005.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 484aa    MW: 55754.1 Da    PI: 9.9596
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_02039.1_g00005.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.61.1e-07207227626
                              HHHCHHHHHHHHHHHHHHHHH CS
                   bZIP_1   6 rerrkqkNReAArrsRqRKka 26 
                              + +r++kNRe+A rsR+RK++
  Rsa1.0_02039.1_g00005.1 207 KHKRMIKNRESAARSRARKQE 227
                              679*****************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.4E-4198277IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-12206266No hitNo description
CDDcd147076.79E-24206271No hitNo description
SuperFamilySSF579596.03E-6207265No hitNo description
PROSITE patternPS000360209224IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MMSSAKHQRN HRVSATNKNK ILNTFSSISS SSPPSSSSSS SPSYSQDSQE AQKSSLITME  60
EVWEDINLAS IHHLNRHSQH PQHNHEPRFR SHDHQNQNHD SMFQDFLNRP LNREPNMPTS  120
LNGNTTTVTA LFSSSPLGAP PATVLSLNSG AGFEFLDNRD PLVIPNSNLH SHNHLTDVPS  180
FNTSFEDLTC FGKKRGHESN EGSGNTKHKR MIKNRESAAR SRARKQECFL GFDSYLQAYT  240
NELEIEVAHL EAENERLRRQ QEQLRMAAAN QPPKKKTLQR RRTRYQRRRR PTLAYLHLFF  300
AATRSPPSLP ICLRSLDLGF CYGDRSARGE DLRWCLLLFW YRGEVVEVMI RSGGRILEFC  360
EDIVFSFDFL SLFRCWGARF RNSFYPLFLL WGRVASVHWS QLPWMLILDG QSLLQPRPLL  420
PAVNKTCSGS CYRFRRGVIV RIRRVENPFK VQWRDLVGIE GLSPWSSYLV LFVDEFPLGK  480
LVFE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1273289KKKTLQRRRTRYQRRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006412047.11e-138hypothetical protein EUTSA_v10025822mg
SwissprotQ84JK21e-115FD_ARATH; Protein FD
TrEMBLA0A078BWI91e-141A0A078BWI9_BRANA; BnaC01g02720D protein
STRINGAl_scaffold_0007_4531e-120(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19342772
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.16e-98bZIP family protein